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genomewiki
Welcome to the Public Support UCSC Genome Browser Wiki
This wiki site provides a forum for sharing information about the UCSC Genome Browser, a web-based tool that provides a fast, easy way to display...
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Gene id conversion - genomewiki
Gene id conversion
Contents
merge/download data from the Table browser
query the public mySQL database
ftp text files
set the clade, genome, assembly
set the group to Genes and Gene Prediction Tracks,...
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Chains Nets - genomewiki
Chains Nets
Chains and nets are higher-level collections of basic pairwise sequence alignments. Cross-species nets are used to make a single-coverage (on the reference genome) collection of pairwise ...
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Genes in gtf or gff format - genomewiki
Genes in gtf or gff format
From genomewiki
There are pre-made GTF format files for every assembly that has knownGene, ncbiRefSeq, refGene, and Ensembl data.
These can be found at the following downloa...
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Genomewiki:About - genomewiki
Genomewiki:About
Genomewiki is operated by the University of California Santa Cruz (UCSC) Genome Bioinformatics Group to facilitate communication and interaction among the developers and users of the ...
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Assembly Hubs - genomewiki
Assembly Hubs
Preface
Please note, if you are working with a genome that has already been submitted
to the NCBI Assembly system, it may
already be available in the UCSC Genome Browser
Please examine t...